Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconokinase | AMED_RS05925 | Not Available | Negative | 1226352 - 1226849 | 17762.9 |
| fadr/gntr family transcriptional regulator | AMED_RS05930 | Not Available | Positive | 1226952 - 1227656 | 25345.3 |
| cobalamin biosynthesis protein | AMED_RS05935 | Not Available | Positive | 1227701 - 1228591 | 30261.7 |
| hypothetical protein | AMED_RS05940 | Not Available | Positive | 1228648 - 1229085 | 15396.9 |
| fmn-binding negative transcriptional regulator | AMED_RS05945 | Not Available | Negative | 1229110 - 1229730 | 22612.7 |
| surf1 family protein | AMED_RS05950 | Not Available | Negative | 1229781 - 1230611 | 29995.8 |
| low molecular weight protein-tyrosine-phosphatase | AMED_RS05955 | Not Available | Negative | 1230661 - 1231122 | 16360.1 |
| hypothetical protein | AMED_RS05960 | Not Available | Negative | 1231356 - 1231760 | 13636.9 |
| chorismate mutase | AMED_RS05965 | Not Available | Negative | 1231857 - 1232438 | 20273.1 |
| nif3-like dinuclear metal center hexameric protein | AMED_RS05970 | Not Available | Positive | 1232470 - 1233291 | 28374.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
