Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family transcriptional regulator | AMED_RS05875 | Not Available | Positive | 1216894 - 1218093 | 41468.7 |
| extracellular solute-binding protein | AMED_RS05880 | Not Available | Positive | 1218118 - 1219476 | 48861.7 |
| carbohydrate abc transporter permease | AMED_RS05885 | Not Available | Positive | 1219611 - 1220498 | 32237.6 |
| carbohydrate abc transporter permease | AMED_RS05890 | Not Available | Positive | 1220495 - 1221385 | 33190.3 |
| 6-phospho-beta-glucosidase | AMED_RS05895 | Not Available | Positive | 1221382 - 1222647 | 45779.3 |
| n-acetylglucosamine kinase | AMED_RS05900 | Not Available | Positive | 1222644 - 1223612 | 32972.6 |
| srpbcc domain-containing protein | AMED_RS05905 | Not Available | Negative | 1223668 - 1224180 | 18745.2 |
| helix-turn-helix transcriptional regulator | AMED_RS05910 | Not Available | Negative | 1224177 - 1224500 | 12628.3 |
| duf2510 domain-containing protein | AMED_RS05915 | Not Available | Negative | 1224625 - 1224891 | 9637.66 |
| gluconate:h+ symporter | AMED_RS05920 | Not Available | Negative | 1224988 - 1226355 | 45944.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
