Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AMED_RS00500 | Not Available | Positive | 102699 - 103478 | 27017.9 |
| glycine betaine abc transporter substrate-binding protein | AMED_RS00505 | Not Available | Positive | 103475 - 104434 | 34569.9 |
| duf6474 family protein | AMED_RS00510 | Not Available | Negative | 104643 - 105104 | 16220.7 |
| tm0106 family recb-like putative nuclease | AMED_RS00515 | Not Available | Positive | 105195 - 106835 | 60508.4 |
| padr family transcriptional regulator | AMED_RS00520 | Not Available | Positive | 106921 - 107553 | 24030.9 |
| class i sam-dependent methyltransferase | AMED_RS00525 | Not Available | Positive | 107687 - 108340 | 23802.2 |
| sdr family nad(p)-dependent oxidoreductase | AMED_RS00530 | Not Available | Negative | 108382 - 109140 | 25851.2 |
| udp-glucose/gdp-mannose dehydrogenase family protein | AMED_RS00535 | Not Available | Positive | 109342 - 110646 | 45368.6 |
| gamma-glutamyltransferase family protein | AMED_RS00540 | Not Available | Positive | 111193 - 112959 | 62469.4 |
| hypothetical protein | AMED_RS00545 | Not Available | Negative | 112956 - 113351 | 14134.5 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
