Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf58 domain-containing protein | AMED_RS05825 | Not Available | Positive | 1204106 - 1205398 | 45835.9 |
| stage ii sporulation protein m | AMED_RS05830 | Not Available | Negative | 1205530 - 1206537 | 35424.1 |
| rdd family protein | AMED_RS05835 | Not Available | Positive | 1206572 - 1207522 | 33372.9 |
| voc family protein | AMED_RS05840 | Not Available | Positive | 1207664 - 1208032 | 12915.3 |
| neutral zinc metallopeptidase | AMED_RS05845 | Not Available | Negative | 1208039 - 1209031 | 34888.1 |
| duf2207 family protein | AMED_RS05850 | Not Available | Positive | 1209622 - 1211337 | 60018.9 |
| duf2207 family protein | AMED_RS05855 | Not Available | Positive | 1211340 - 1212908 | 55047.3 |
| pitrilysin family protein | AMED_RS05860 | Not Available | Positive | 1212918 - 1214210 | 47108.3 |
| pitrilysin family protein | AMED_RS05865 | Not Available | Positive | 1214207 - 1215586 | 48524.8 |
| nad(+) diphosphatase | AMED_RS05870 | Not Available | Positive | 1215586 - 1216605 | 36562.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
