Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | AMED_RS05775 | Not Available | Positive | 1190064 - 1193237 | 113281.0 |
| atp-dependent dna helicase | AMED_RS05780 | Not Available | Positive | 1193413 - 1196655 | 118035.0 |
| membrane protein | AMED_RS05785 | Not Available | Negative | 1196822 - 1197190 | 13006.2 |
| trka family potassium uptake protein | AMED_RS05790 | Not Available | Positive | 1197270 - 1198349 | 38360.6 |
| hypothetical protein | AMED_RS05795 | Not Available | Positive | 1198431 - 1198865 | 14687.9 |
| neutral zinc metallopeptidase | AMED_RS05800 | Not Available | Negative | 1198858 - 1199880 | 36259.3 |
| membrane protein | AMED_RS05805 | Not Available | Positive | 1200131 - 1201327 | 41867.3 |
| duf4129 domain-containing protein | AMED_RS05810 | Not Available | Positive | 1201321 - 1201962 | 23298.9 |
| duf4350 domain-containing protein | AMED_RS05815 | Not Available | Positive | 1201997 - 1203136 | 39447.3 |
| moxr family atpase | AMED_RS05820 | Not Available | Positive | 1203133 - 1204104 | 34492.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
