Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nark/nasa family nitrate transporter | AMED_RS05725 | Not Available | Positive | 1179948 - 1181339 | 49386.8 |
| nitrite reductase large subunit nirb | AMED_RS05730 | Not Available | Positive | 1181341 - 1183863 | 88596.8 |
| nitrite reductase small subunit nird | AMED_RS05735 | Not Available | Positive | 1183860 - 1184201 | 12001.2 |
| uroporphyrinogen-iii synthase | AMED_RS05740 | Not Available | Positive | 1184198 - 1185301 | 37805.9 |
| duf4097 family beta strand repeat-containing protein | AMED_RS05745 | Not Available | Positive | 1185394 - 1186056 | 22215.1 |
| dna glycosylase alkz-like family protein | AMED_RS05750 | Not Available | Negative | 1186146 - 1187249 | 39444.6 |
| duf3224 domain-containing protein | AMED_RS05755 | Not Available | Negative | 1187259 - 1187654 | 13990.1 |
| yafy family protein | AMED_RS05760 | Not Available | Positive | 1187718 - 1188686 | 35956.0 |
| uroporphyrinogen-iii synthase | AMED_RS05765 | Not Available | Positive | 1188679 - 1189488 | 27757.3 |
| mgmt family protein | AMED_RS05770 | Not Available | Negative | 1189580 - 1189900 | 11650.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
