Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS05675 | Not Available | Negative | 1168210 - 1168980 | 28668.3 |
| diiron oxygenase | AMED_RS05680 | Not Available | Positive | 1169036 - 1169944 | 34457.7 |
| alpha/beta fold hydrolase | AMED_RS05685 | Not Available | Positive | 1169941 - 1170849 | 32039.9 |
| tetr/acrr family transcriptional regulator | AMED_RS05690 | Not Available | Negative | 1170911 - 1171537 | 22670.9 |
| alpha/beta fold hydrolase | AMED_RS05695 | Not Available | Positive | 1171651 - 1172691 | 36908.8 |
| duf3152 domain-containing protein | AMED_RS05700 | Not Available | Positive | 1172773 - 1173936 | 41449.5 |
| adenylyltransferase/sulfurtransferase moez | AMED_RS05705 | Not Available | Positive | 1174042 - 1175217 | 41803.2 |
| tigr02569 family protein | AMED_RS05710 | Not Available | Positive | 1175359 - 1176156 | 28779.3 |
| molybdopterin oxidoreductase family protein | AMED_RS05715 | Not Available | Positive | 1176479 - 1178527 | 72994.7 |
| fad-dependent oxidoreductase | AMED_RS05720 | Not Available | Positive | 1178524 - 1179951 | 49295.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
