Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marc family protein | AMED_RS05625 | Not Available | Positive | 1158092 - 1158721 | 21395.1 |
| alpha-l-rhamnosidase c-terminal domain-containing protein | AMED_RS05630 | Not Available | Positive | 1158846 - 1161308 | 86326.6 |
| pd-(d/e)xk nuclease family protein | AMED_RS05635 | Not Available | Positive | 1161582 - 1162433 | 31244.8 |
| hypothetical protein | AMED_RS05640 | Not Available | Positive | 1162446 - 1163039 | 19935.6 |
| hypothetical protein | AMED_RS05645 | Not Available | Negative | 1163174 - 1164487 | 45777.1 |
| dead/deah box helicase | AMED_RS05650 | Not Available | Negative | 1164514 - 1166310 | 64582.0 |
| ferritin-like fold-containing protein | AMED_RS05655 | Not Available | Positive | 1166541 - 1167194 | 23162.6 |
| duf3107 domain-containing protein | AMED_RS05660 | Not Available | Positive | 1167314 - 1167544 | 8246.85 |
| hypothetical protein | AMED_RS48225 | Not Available | Positive | 1167669 - 1167827 | 5764.93 |
| duf4873 domain-containing protein | AMED_RS05670 | Not Available | Negative | 1167896 - 1168213 | 11494.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
