Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS05575 | Not Available | Positive | 1150357 - 1151100 | 26047.5 |
| parb n-terminal domain-containing protein | AMED_RS05580 | Not Available | Negative | 1151139 - 1151978 | 32438.0 |
| metallophosphoesterase | AMED_RS05585 | Not Available | Negative | 1151975 - 1152625 | 23770.4 |
| magnesium/cobalt transporter cora | AMED_RS05590 | Not Available | Negative | 1152805 - 1153887 | 40646.2 |
| maoc family dehydratase | AMED_RS05595 | Not Available | Positive | 1154208 - 1154711 | 18981.5 |
| duf2332 domain-containing protein | AMED_RS05600 | Not Available | Positive | 1154719 - 1155813 | 38975.7 |
| nudix domain-containing protein | AMED_RS05605 | Not Available | Negative | 1155814 - 1156227 | 14596.2 |
| hypothetical protein | AMED_RS05610 | Not Available | Positive | 1156423 - 1156587 | 5566.97 |
| ph domain-containing protein | AMED_RS05615 | Not Available | Positive | 1156608 - 1157168 | 21447.6 |
| php domain-containing protein | AMED_RS05620 | Not Available | Positive | 1157218 - 1158090 | 30584.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
