Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | AMED_RS05525 | Not Available | Positive | 1141156 - 1141995 | 30298.5 |
| abc transporter atp-binding protein | AMED_RS05530 | Not Available | Positive | 1142000 - 1143181 | 42438.4 |
| hypothetical protein | AMED_RS05535 | Not Available | Negative | 1143225 - 1144097 | 29366.6 |
| pspc domain-containing protein | AMED_RS05540 | Not Available | Positive | 1144384 - 1144578 | 6965.91 |
| tetr/acrr family transcriptional regulator | AMED_RS05545 | Not Available | Negative | 1144747 - 1145412 | 24743.7 |
| mfs transporter | AMED_RS05550 | Not Available | Positive | 1145531 - 1147030 | 51483.4 |
| response regulator transcription factor | AMED_RS05555 | Not Available | Negative | 1147067 - 1147726 | 23666.2 |
| sensor histidine kinase | AMED_RS05560 | Not Available | Negative | 1147723 - 1148865 | 40618.0 |
| cpbp family intramembrane glutamic endopeptidase | AMED_RS05565 | Not Available | Negative | 1148862 - 1149695 | 28602.2 |
| sige family rna polymerase sigma factor | AMED_RS05570 | Not Available | Positive | 1149869 - 1150357 | 18353.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
