Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1003 domain-containing protein | AMED_RS05475 | Not Available | Negative | 1131721 - 1132221 | 19062.8 |
| magnesium transporter mgte n-terminal domain-containing protein | AMED_RS05480 | Not Available | Negative | 1132214 - 1133491 | 46199.6 |
| aminoglycoside phosphotransferase family protein | AMED_RS05485 | Not Available | Negative | 1133502 - 1134476 | 35289.2 |
| slipin family protein | AMED_RS05490 | Not Available | Positive | 1134570 - 1135451 | 31900.5 |
| duf4190 domain-containing protein | AMED_RS05495 | Not Available | Negative | 1135448 - 1136209 | 25525.5 |
| duf4190 domain-containing protein | AMED_RS05500 | Not Available | Negative | 1136250 - 1136642 | 13246.2 |
| acyl-coa dehydrogenase family protein | AMED_RS05505 | Not Available | Positive | 1136784 - 1137980 | 43184.0 |
| general stress protein | AMED_RS05510 | Not Available | Positive | 1138094 - 1138621 | 18484.7 |
| abc transporter substrate-binding protein | AMED_RS05515 | Not Available | Positive | 1138866 - 1140188 | 47186.2 |
| carbohydrate abc transporter permease | AMED_RS05520 | Not Available | Positive | 1140185 - 1141156 | 34835.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
