Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m17 family metallopeptidase | AMED_RS05425 | Not Available | Positive | 1120335 - 1121846 | 52208.4 |
| lysr family transcriptional regulator | AMED_RS05430 | Not Available | Negative | 1121771 - 1122736 | 33581.5 |
| mfs transporter | AMED_RS05435 | Not Available | Positive | 1122799 - 1124031 | 40865.7 |
| isas1 family transposase | AMED_RS05440 | Not Available | Positive | 1124178 - 1125287 | 40088.2 |
| o-methyltransferase | AMED_RS05445 | Not Available | Negative | 1125419 - 1126063 | 22287.8 |
| rna polymerase sigma factor sige | AMED_RS05450 | Not Available | Positive | 1126275 - 1126865 | 22107.0 |
| anti-sigma factor | AMED_RS05455 | Not Available | Positive | 1126862 - 1127512 | 21597.7 |
| s1c family serine protease | AMED_RS05460 | Not Available | Positive | 1128181 - 1129710 | 51271.8 |
| sec-independent protein translocase protein tatb | AMED_RS05465 | Not Available | Positive | 1129788 - 1130210 | 15152.0 |
| mrp/nbp35 family atp-binding protein | AMED_RS05470 | Not Available | Negative | 1130565 - 1131710 | 39663.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
