Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol reductant abc exporter subunit cydd | AMED_RS05375 | Not Available | Negative | 1112981 - 1114528 | 53155.5 |
| cytochrome d ubiquinol oxidase subunit ii | AMED_RS05380 | Not Available | Negative | 1114538 - 1115524 | 34737.9 |
| cytochrome ubiquinol oxidase subunit i | AMED_RS05385 | Not Available | Negative | 1115528 - 1116688 | 42044.4 |
| helix-turn-helix transcriptional regulator | AMED_RS05390 | Not Available | Positive | 1116749 - 1117066 | 11757.2 |
| permease prefix domain 1-containing protein | AMED_RS05395 | Not Available | Positive | 1117063 - 1117731 | 24190.7 |
| diviva domain-containing protein | AMED_RS05400 | Not Available | Positive | 1117728 - 1118051 | 11914.5 |
| srpbcc family protein | AMED_RS05405 | Not Available | Positive | 1118048 - 1118506 | 16535.9 |
| dna-3-methyladenine glycosylase i | AMED_RS05410 | Not Available | Positive | 1118499 - 1119062 | 20687.8 |
| enoyl-coa hydratase-related protein | AMED_RS05415 | Not Available | Negative | 1119083 - 1119877 | 27106.4 |
| duf3117 domain-containing protein | AMED_RS05420 | Not Available | Positive | 1120077 - 1120244 | 5634.9 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
