Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS00450 | Not Available | Negative | 93997 - 94410 | 15156.1 |
| hypothetical protein | AMED_RS00455 | Not Available | Negative | 94423 - 94761 | 11880.2 |
| helix-turn-helix transcriptional regulator | AMED_RS00460 | Not Available | Positive | 95080 - 96465 | 50247.3 |
| phosphotransferase family protein | AMED_RS00465 | Not Available | Positive | 96488 - 97375 | 32542.2 |
| copper resistance d family protein | AMED_RS00470 | Not Available | Negative | 97586 - 98614 | 35533.5 |
| copper resistance copc family protein | AMED_RS00475 | Not Available | Negative | 98614 - 99162 | 17958.5 |
| ycni family protein | AMED_RS00480 | Not Available | Negative | 99265 - 100032 | 25915.2 |
| hypothetical protein | AMED_RS00485 | Not Available | Negative | 100103 - 100603 | 16874.2 |
| abc transporter permease | AMED_RS00490 | Not Available | Positive | 100896 - 101543 | 22222.9 |
| abc transporter atp-binding protein | AMED_RS00495 | Not Available | Positive | 101536 - 102702 | 42287.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
