Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AMED_RS05275 | Not Available | Negative | 1087617 - 1088027 | 13593.2 |
| succinyl-diaminopimelate desuccinylase | AMED_RS05280 | Not Available | Positive | 1088072 - 1089142 | 37715.8 |
| duf3152 domain-containing protein | AMED_RS05285 | Not Available | Positive | 1089387 - 1090199 | 28253.2 |
| chitinase | AMED_RS05290 | Not Available | Negative | 1090196 - 1091248 | 36793.1 |
| m28 family peptidase | AMED_RS05295 | Not Available | Negative | 1091388 - 1092992 | 54664.2 |
| m4 family metallopeptidase | AMED_RS05300 | Not Available | Negative | 1093078 - 1095342 | 75977.5 |
| helix-turn-helix domain-containing protein | AMED_RS49360 | Not Available | Negative | 1095655 - 1096920 | 45225.1 |
| m4 family metallopeptidase | AMED_RS05310 | Not Available | Negative | 1096993 - 1099011 | 68266.8 |
| tetratricopeptide repeat protein | AMED_RS05315 | Not Available | Negative | 1099391 - 1100677 | 46594.9 |
| tigr00730 family rossman fold protein | AMED_RS05320 | Not Available | Positive | 1101091 - 1101876 | 28879.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
