Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coenzyme f420-0:l-glutamate ligase | AMED_RS05225 | Not Available | Negative | 1078678 - 1080024 | 47727.9 |
| 2-phospho-l-lactate transferase | AMED_RS05230 | Not Available | Negative | 1080017 - 1081006 | 34423.1 |
| n-acetyltransferase | AMED_RS05235 | Not Available | Negative | 1081003 - 1081755 | 26083.8 |
| hypothetical protein | AMED_RS05240 | Not Available | Positive | 1081814 - 1081996 | 6926.11 |
| ferredoxin | AMED_RS05245 | Not Available | Positive | 1082121 - 1082441 | 11625.5 |
| succinyldiaminopimelate transaminase | AMED_RS05250 | Not Available | Positive | 1082438 - 1083529 | 39133.1 |
| tetr/acrr family transcriptional regulator | AMED_RS05255 | Not Available | Negative | 1083523 - 1084140 | 22395.1 |
| fad-dependent monooxygenase | AMED_RS05260 | Not Available | Positive | 1084222 - 1085628 | 49800.8 |
| chad domain-containing protein | AMED_RS05265 | Not Available | Negative | 1085644 - 1086576 | 34066.3 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | AMED_RS05270 | Not Available | Negative | 1086605 - 1087588 | 33686.0 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
