Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | AMED_RS05175 | Not Available | Positive | 1071083 - 1072159 | 37083.1 |
| glycosyltransferase family 1 protein | AMED_RS05180 | Not Available | Positive | 1072244 - 1073374 | 39819.9 |
| glycosyltransferase family 2 protein | AMED_RS05185 | Not Available | Positive | 1073442 - 1074302 | 31586.2 |
| hypothetical protein | AMED_RS05190 | Not Available | Negative | 1074299 - 1074763 | 16635.5 |
| sugar phosphate nucleotidyltransferase | AMED_RS05195 | Not Available | Positive | 1074905 - 1075993 | 38233.2 |
| dna-3-methyladenine glycosylase | AMED_RS05200 | Not Available | Positive | 1075998 - 1076894 | 32698.2 |
| hypothetical protein | AMED_RS05205 | Not Available | Negative | 1077010 - 1077279 | 9375.57 |
| gntr family transcriptional regulator | AMED_RS05210 | Not Available | Negative | 1077279 - 1077644 | 12894.3 |
| hypothetical protein | AMED_RS05215 | Not Available | Negative | 1077641 - 1078108 | 15963.0 |
| nudix hydrolase | AMED_RS05220 | Not Available | Negative | 1078136 - 1078681 | 18998.3 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
