Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | AMED_RS05125 | Not Available | Positive | 1059415 - 1059855 | 15316.0 |
| tigr03089 family protein | AMED_RS05130 | Not Available | Negative | 1059906 - 1060610 | 24623.9 |
| nad(p)h-binding protein | AMED_RS05135 | Not Available | Positive | 1060720 - 1061556 | 29074.3 |
| lcp family protein | AMED_RS05140 | Not Available | Negative | 1061549 - 1062748 | 41432.1 |
| lcp family protein | AMED_RS05145 | Not Available | Negative | 1062966 - 1064492 | 53402.8 |
| dtdp-glucose 4,6-dehydratase | AMED_RS05150 | Not Available | Positive | 1064630 - 1065619 | 35822.3 |
| dtdp-4-dehydrorhamnose reductase | AMED_RS05155 | Not Available | Positive | 1065625 - 1066530 | 31052.3 |
| glycosyltransferase family 1 protein | AMED_RS05160 | Not Available | Negative | 1066516 - 1067601 | 38635.4 |
| glycosyltransferase | AMED_RS05165 | Not Available | Negative | 1067594 - 1070104 | 91112.2 |
| glycosyltransferase family 2 protein | AMED_RS05170 | Not Available | Negative | 1070138 - 1071073 | 33142.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
