Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide synthase | AMED_RS05075 | Not Available | Positive | 1049350 - 1050534 | 42247.7 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | AMED_RS05080 | Not Available | Positive | 1050545 - 1051042 | 17019.7 |
| hypothetical protein | AMED_RS05085 | Not Available | Positive | 1051152 - 1052345 | 40636.5 |
| hypothetical protein | AMED_RS05090 | Not Available | Positive | 1052471 - 1053196 | 26129.8 |
| class i adenylate-forming enzyme family protein | AMED_RS05095 | Not Available | Negative | 1053193 - 1054866 | 58620.3 |
| acyl-coa dehydrogenase family protein | AMED_RS05100 | Not Available | Positive | 1054973 - 1056130 | 41273.0 |
| alpha/beta hydrolase | AMED_RS05105 | Not Available | Positive | 1056216 - 1056824 | 21277.2 |
| triacylglycerol lipase | AMED_RS05110 | Not Available | Positive | 1056930 - 1057859 | 31795.9 |
| hypothetical protein | AMED_RS05115 | Not Available | Positive | 1057928 - 1058353 | 15447.0 |
| duf1206 domain-containing protein | AMED_RS05120 | Not Available | Positive | 1058487 - 1059302 | 28061.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
