Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AMED_RS05025 | Not Available | Negative | 1038632 - 1039255 | 22674.4 |
| response regulator transcription factor | AMED_RS05030 | Not Available | Negative | 1039359 - 1040003 | 22584.3 |
| nad(p)h-binding protein | AMED_RS05035 | Not Available | Negative | 1040023 - 1040871 | 30138.7 |
| mfs transporter | AMED_RS05040 | Not Available | Negative | 1040882 - 1042183 | 44210.2 |
| gtra family protein | AMED_RS05045 | Not Available | Negative | 1042414 - 1042941 | 19923.6 |
| gtra family protein | AMED_RS05050 | Not Available | Negative | 1042979 - 1043488 | 18945.2 |
| sigma-70 family rna polymerase sigma factor | AMED_RS05055 | Not Available | Negative | 1043499 - 1045616 | 72594.0 |
| hypothetical protein | AMED_RS05060 | Not Available | Positive | 1045887 - 1046732 | 29276.1 |
| glycosyltransferase 87 family protein | AMED_RS05065 | Not Available | Positive | 1046804 - 1048153 | 49600.8 |
| glycosyltransferase 87 family protein | AMED_RS05070 | Not Available | Positive | 1048128 - 1049336 | 42936.4 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
