Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c40 family peptidase | AMED_RS04975 | Not Available | Negative | 1027406 - 1028434 | 34732.0 |
| biotin--[acetyl-coa-carboxylase] ligase | AMED_RS04980 | Not Available | Positive | 1028516 - 1029313 | 27025.1 |
| ph domain-containing protein | AMED_RS04985 | Not Available | Positive | 1029398 - 1029988 | 21890.6 |
| hydroxymethylglutaryl-coa lyase | AMED_RS04990 | Not Available | Positive | 1029988 - 1030914 | 32409.8 |
| tnt domain-containing protein | AMED_RS04995 | Not Available | Positive | 1031142 - 1032125 | 34958.4 |
| hypothetical protein | AMED_RS05000 | Not Available | Positive | 1032125 - 1032385 | 9712.45 |
| gh92 family glycosyl hydrolase | AMED_RS05005 | Not Available | Negative | 1032411 - 1035671 | 115310.0 |
| histidinol-phosphatase | AMED_RS05010 | Not Available | Negative | 1035801 - 1036586 | 27954.5 |
| response regulator transcription factor | AMED_RS05015 | Not Available | Positive | 1036629 - 1037324 | 25491.8 |
| atp-binding protein | AMED_RS05020 | Not Available | Positive | 1037329 - 1038612 | 45440.7 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
