Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AMED_RS04925 | Not Available | Negative | 1020329 - 1020988 | 23632.3 |
| class i sam-dependent methyltransferase | AMED_RS04930 | Not Available | Negative | 1021004 - 1021822 | 28762.8 |
| dihydrofolate reductase family protein | AMED_RS04935 | Not Available | Positive | 1022013 - 1022600 | 21043.0 |
| sigma-70 family rna polymerase sigma factor | AMED_RS04940 | Not Available | Negative | 1022590 - 1023444 | 30226.4 |
| alkene reductase | AMED_RS04945 | Not Available | Positive | 1023510 - 1024559 | 37057.8 |
| hypothetical protein | AMED_RS04950 | Not Available | Negative | 1024517 - 1024702 | 6449.81 |
| voc family protein | AMED_RS04955 | Not Available | Negative | 1024789 - 1025127 | 11882.7 |
| duf6223 family protein | AMED_RS04960 | Not Available | Negative | 1025138 - 1025458 | 10127.7 |
| sensor histidine kinase | AMED_RS04965 | Not Available | Positive | 1025650 - 1026750 | 38136.8 |
| response regulator transcription factor | AMED_RS04970 | Not Available | Positive | 1026747 - 1027403 | 23520.6 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
