Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin family protein | AMED_RS04875 | Not Available | Positive | 1012390 - 1012953 | 20521.6 |
| tetr/acrr family transcriptional regulator | AMED_RS04880 | Not Available | Negative | 1012950 - 1013522 | 20585.4 |
| fad-dependent monooxygenase | AMED_RS04885 | Not Available | Positive | 1013609 - 1014799 | 43490.5 |
| helix-turn-helix domain-containing protein | AMED_RS04890 | Not Available | Negative | 1014765 - 1015130 | 13395.3 |
| nad(p)-dependent oxidoreductase | AMED_RS04895 | Not Available | Positive | 1015213 - 1016070 | 28950.6 |
| sdr family oxidoreductase | AMED_RS04900 | Not Available | Positive | 1016067 - 1016816 | 25787.0 |
| glxa family transcriptional regulator | AMED_RS04905 | Not Available | Positive | 1016965 - 1017963 | 36037.1 |
| transglutaminase-like domain-containing protein | AMED_RS04910 | Not Available | Positive | 1017986 - 1018870 | 32540.6 |
| lysr family transcriptional regulator | AMED_RS04915 | Not Available | Negative | 1018827 - 1019729 | 32131.4 |
| nuclear transport factor 2 family protein | AMED_RS04920 | Not Available | Positive | 1019826 - 1020209 | 14118.8 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
