Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis mediterranei |
| Strain | U32 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Filamentous |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
1472594 bp
Thymine Count
1466081 bp
Guanine Count
3644933 bp
Cytosine Count
3653107 bp
Genome Length
10236715 bp
Protein-coding Genes
9582 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa ester lyase | AMED_RS00400 | Not Available | Negative | 82855 - 83718 | 30946.8 |
| coa ester lyase | AMED_RS00405 | Not Available | Negative | 83715 - 84785 | 38308.0 |
| hypothetical protein | AMED_RS00410 | Not Available | Positive | 85209 - 85862 | 22960.6 |
| nad(p)h-binding protein | AMED_RS00415 | Not Available | Positive | 85895 - 86545 | 22278.3 |
| ribose-phosphate pyrophosphokinase | AMED_RS00420 | Not Available | Positive | 86542 - 87492 | 34642.9 |
| d-arabinono-1,4-lactone oxidase | AMED_RS00425 | Not Available | Negative | 87489 - 88784 | 46887.6 |
| amino acid deaminase/aldolase | AMED_RS00430 | Not Available | Positive | 88871 - 90055 | 42530.1 |
| tetr/acrr family transcriptional regulator | AMED_RS00435 | Not Available | Negative | 90267 - 90914 | 23918.7 |
| gh1 family beta-glucosidase | AMED_RS00440 | Not Available | Positive | 91045 - 92361 | 48728.2 |
| mfs transporter | AMED_RS00445 | Not Available | Positive | 92354 - 93613 | 43959.1 |
Pathways
1351 pathways
Health Effects
No health effects information available for this bacterium.
