Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Syntrophomonadaceae
Genus
Syntrophothermus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Syntrophomonadaceae |
| Genus | Syntrophothermus |
| Species | Syntrophothermus lipocalidus |
| Strain | DSM 12680 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 1 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | 55 |
| Temperature range | Thermophilic |
| Habitat | Specialized |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
587412 bp
Thymine Count
591567 bp
Guanine Count
612971 bp
Cytosine Count
613609 bp
Genome Length
2405559 bp
Protein-coding Genes
2339 genes
Non-Coding Genes
56 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coot family nickel-binding protein | SLIP_RS12290 | Not Available | Negative | 383659 - 384465 | 30322.7 |
| fmde family protein | SLIP_RS01835 | Not Available | Negative | 384545 - 385144 | 22385.8 |
| duf3842 family protein | SLIP_RS01840 | Not Available | Negative | 385193 - 385618 | 14731.0 |
| sensor histidine kinase | SLIP_RS01845 | Not Available | Negative | 385770 - 386735 | 35998.9 |
| lyttr family dna-binding domain-containing protein | SLIP_RS01850 | Not Available | Negative | 386793 - 387575 | 29330.9 |
| hydrogenase maturation nickel metallochaperone hypa | SLIP_RS01855 | Not Available | Positive | 387828 - 388223 | 14260.1 |
| hydrogenase nickel incorporation protein hypb | SLIP_RS01860 | Not Available | Positive | 388180 - 388851 | 25357.8 |
| hydrogenase small subunit | SLIP_RS01865 | Not Available | Positive | 389269 - 390327 | 37380.6 |
| nickel-dependent hydrogenase large subunit | SLIP_RS01870 | Not Available | Positive | 390327 - 391769 | 53596.6 |
| ni/fe-hydrogenase, b-type cytochrome subunit | SLIP_RS01875 | Not Available | Positive | 391783 - 392403 | 23799.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
