Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1

Gram-positiveRodNon-motileFacultative

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Propionibacteriaceae

Genus

Propionibacterium

Description

Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 is a gram-positive, non-motile rod-shaped bacterium that exhibits facultative anaerobic characteristics, allowing it to thrive in both aerobic and anaerobic environments. This microorganism is classified as mesophilic, indicating that it grows optimally at moderate temperatures. P. freudenreichii subsp. shermanii CIRM-BIA1 has a single membrane and possesses one replicon, which supports its genetic stability and efficient replication. This strain is free-living and does not exhibit pathogenicity, making it a safe organism for study and potential applications in food production and microbiology. Notably, P. freudenreichii subsp. shermanii is non-sporulating, which influences its survival strategies and ecological roles in its various habitats. The strain is documented under the accession number NC_014215.1, which provides a reference for genetic and genomic studies. Understanding the traits of P. freudenreichii subsp. shermanii CIRM-BIA1 contributes to insights into its ecological roles, particularly in dairy fermentation processes, where it is known for its contribution to flavor and texture in cheese production. Its non-pathogenic nature and ability to thrive in diverse environments reflect its potential as a beneficial microorganism within both natural ecosystems and industrial applications.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyPropionibacteriaceae
GenusPropionibacterium
SpeciesPropionibacterium freudenreichii
StrainCIRM-BIA1

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes1
Image of Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNo

Genome Summary

Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1


Gene Summary

Adenine Count

428064 bp

Thymine Count

428381 bp

Guanine Count

878125 bp

Cytosine Count

881814 bp

Genome Length

2616384 bp

Protein-coding Genes

2282 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
s-layer homology domain-containing proteinPFREUD_RS12135Not AvailablePositive15864 - 1753159314.6
hypothetical proteinPFREUD_RS00060Not AvailablePositive17774 - 1833420287.3
isl3-like element ispfr1 family transposasePFREUD_RS00065Not AvailablePositive18416 - 1972348280.0
hypothetical proteinPFREUD_RS00070Not AvailablePositive19746 - 2022217052.8
dna topoisomerase (atp-hydrolyzing) subunit bPFREUD_RS00075Not AvailablePositive20700 - 2268572852.0
dna gyrase subunit aPFREUD_RS00080Not AvailablePositive22732 - 25467100645.0
hypothetical proteinPFREUD_RS00085Not AvailablePositive25689 - 2657331413.7
duf1540 domain-containing proteinPFREUD_RS00090Not AvailableNegative26704 - 269799355.02
ammememoradisam system protein bPFREUD_RS00095Not AvailablePositive27223 - 2801727851.1
ammememoradisam system protein aPFREUD_RS00100Not AvailablePositive28082 - 2865421082.0

Displaying genes 11 – 20 of 2336 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

1905 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da

Displaying 1–10 of 1905 metabolites

Health Effects

No health effects information available for this bacterium.