Zunongwangia profunda SM-A87

Gram-negativerodNon-motileaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Zunongwangia

Description

Zunongwangia profunda SM-A87 is a Gram-negative, aerobic, rod-shaped bacterium that exhibits a mesophilic growth profile, with an optimal temperature of 29°C. This organism has a structure characterized by two membranes and contains a single replicon. Notably, Zunongwangia profunda is non-motile, meaning it lacks the ability to move independently, despite having flagella. One of the significant features of Zunongwangia profunda is its non-pathogenic nature, indicating that it does not pose a threat to human health or cause disease. Additionally, this bacterium does not form spores, which can be a critical trait for survival under adverse environmental conditions. The ecological role of Zunongwangia profunda in its natural habitat may be linked to its aerobic metabolism, allowing it to thrive in oxygen-rich environments. Its ability to grow optimally at a moderate temperature suggests that it may inhabit specific ecological niches where such conditions prevail, contributing to the microbial diversity and functioning of those ecosystems. Overall, the characteristics of Zunongwangia profunda SM-A87 highlight its potential role in aerobic processes within its environment, although further studies would be necessary to elucidate its specific contributions to microbial communities. The accession number NC_014041.1 provides a reference for genomic and biological studies related to this organism.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusZunongwangia
SpeciesZunongwangia profunda
StrainSM-A87

Profile

Physiology
Gram staining propertiesNegative
Shaperod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Zunongwangia profunda SM-A87
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNo

Genome Summary

Zunongwangia profunda SM-A87, complete sequence.

Gene Summary

Adenine Count

1636611 bp

Thymine Count

1634226 bp

Guanine Count

933991 bp

Cytosine Count

923359 bp

Genome Length

5128187 bp

Protein-coding Genes

4444 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter substrate-binding proteinZPR_RS14360Q128M1Negative3286556 - 328753636731.1
glucuronate isomeraseZPR_RS14365A5FC03Negative3287567 - 328896453501.2
glycoside hydrolase family 3 n-terminal domain-containing proteinZPR_RS14370D5EY15Negative3288969 - 329117682212.5
alpha-glucuronidase family glycosyl hydrolaseZPR_RS14375B3PC73Positive3291351 - 329350481862.7
sdr family nad(p)-dependent oxidoreductaseZPR_RS14380Not AvailablePositive3293512 - 329425526419.9
endo-1,4-beta-xylanaseZPR_RS14385Q12603Positive3294369 - 329549343698.1
glycosyl hydrolase 115 family proteinZPR_RS14390Not AvailablePositive3295435 - 3298251106397.0
ragb/susd family nutrient uptake outer membrane proteinZPR_RS14395Not AvailableNegative3298741 - 330066070826.1
tonb-dependent receptorZPR_RS14400Not AvailableNegative3300670 - 3303810114550.0
hypothetical proteinZPR_RS23440Not AvailablePositive3304177 - 33043807957.75

Displaying genes 2881 – 2890 of 4505 in total

Metabolites

437 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 437 metabolites

Health Effects

No health effects information available for this bacterium.