Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella violacea |
| Strain | DSS12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Psychrophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1371241 bp
Thymine Count
1371987 bp
Guanine Count
1108518 bp
Cytosine Count
1110352 bp
Genome Length
4962103 bp
Protein-coding Genes
3986 genes
Non-Coding Genes
187 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein ygfx | SVI_RS04375 | Not Available | Positive | 1081916 - 1082374 | 17502.3 |
| l-aspartate oxidase | SVI_RS04380 | Not Available | Negative | 1082380 - 1083993 | 59469.7 |
| rna polymerase sigma factor rpoe | SVI_RS04385 | Not Available | Positive | 1084194 - 1084772 | 21807.9 |
| sigma-e factor negative regulatory protein | SVI_RS04390 | Not Available | Positive | 1084824 - 1085435 | 21987.0 |
| mucb/rseb c-terminal domain-containing protein | SVI_RS04395 | Not Available | Positive | 1085467 - 1086399 | 34887.4 |
| soxr reducing system rsec family protein | SVI_RS04400 | Not Available | Positive | 1086454 - 1086909 | 16308.0 |
| translation elongation factor 4 | SVI_RS04405 | Not Available | Positive | 1087056 - 1088846 | 65971.7 |
| signal peptidase i | SVI_RS04410 | Not Available | Positive | 1089002 - 1089919 | 34449.5 |
| ribonuclease iii | SVI_RS04415 | Not Available | Positive | 1089920 - 1090597 | 25153.7 |
| gtpase era | SVI_RS04420 | Not Available | Positive | 1090594 - 1091601 | 37831.7 |
Pathways
1440 pathways
Health Effects
No health effects information available for this bacterium.
