Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella violacea |
| Strain | DSS12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Psychrophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1371241 bp
Thymine Count
1371987 bp
Guanine Count
1108518 bp
Cytosine Count
1110352 bp
Genome Length
4962103 bp
Protein-coding Genes
3986 genes
Non-Coding Genes
187 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trkh family potassium uptake protein | SVI_RS00230 | Not Available | Positive | 58020 - 59477 | 53341.4 |
| menaquinone-dependent protoporphyrinogen ix dehydrogenase | SVI_RS00235 | Not Available | Positive | 59590 - 60117 | 19977.1 |
| arsr/smtb family transcription factor | SVI_RS00240 | Not Available | Negative | 60430 - 60735 | 11335.8 |
| trkh family potassium uptake protein | SVI_RS00245 | Not Available | Negative | 62123 - 63565 | 52933.4 |
| trk system potassium transporter trka | SVI_RS21300 | Not Available | Negative | 63643 - 65052 | 51687.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | SVI_RS21305 | Not Available | Negative | 65062 - 66339 | 47470.9 |
| methionyl-trna formyltransferase | SVI_RS00260 | Not Available | Negative | 66339 - 67298 | 34747.7 |
| peptide deformylase | SVI_RS00265 | Not Available | Negative | 67306 - 67818 | 19447.4 |
| lysm peptidoglycan-binding domain-containing protein | SVI_RS00270 | Not Available | Positive | 68000 - 69100 | 40782.5 |
| dna-processing protein dpra | SVI_RS00275 | Not Available | Positive | 69295 - 70314 | 36958.4 |
Pathways
1440 pathways
Health Effects
No health effects information available for this bacterium.
