Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella violacea |
| Strain | DSS12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Psychrophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1371241 bp
Thymine Count
1371987 bp
Guanine Count
1108518 bp
Cytosine Count
1110352 bp
Genome Length
4962103 bp
Protein-coding Genes
3986 genes
Non-Coding Genes
187 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter substrate-binding protein rbsb | SVI_RS03020 | Not Available | Positive | 756442 - 757320 | 30503.9 |
| ribokinase | SVI_RS03025 | Not Available | Positive | 757513 - 758427 | 31285.7 |
| laci family dna-binding transcriptional regulator | SVI_RS03030 | Not Available | Positive | 758609 - 759616 | 36595.1 |
| delta-class carbonic anhydrase | SVI_RS03035 | Not Available | Negative | 759703 - 760566 | 30926.5 |
| histone deacetylase | SVI_RS03040 | Not Available | Negative | 760827 - 761762 | 34913.6 |
| hypothetical protein | SVI_RS03045 | Not Available | Negative | 761834 - 762328 | 19166.2 |
| m4 family metallopeptidase | SVI_RS03050 | Not Available | Negative | 762639 - 764549 | 67512.4 |
| hypothetical protein | SVI_RS03055 | Not Available | Positive | 764945 - 765151 | 7653.22 |
| duf3332 family protein | SVI_RS03060 | Not Available | Positive | 765666 - 765995 | 11973.7 |
| nad/nadp octopine/nopaline dehydrogenase family protein | SVI_RS03065 | Not Available | Positive | 767562 - 768743 | 43846.4 |
Pathways
1440 pathways
Health Effects
No health effects information available for this bacterium.
