Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella violacea |
| Strain | DSS12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Psychrophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1371241 bp
Thymine Count
1371987 bp
Guanine Count
1108518 bp
Cytosine Count
1110352 bp
Genome Length
4962103 bp
Protein-coding Genes
3986 genes
Non-Coding Genes
187 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | SVI_RS01385 | Not Available | Positive | 347368 - 348591 | 44627.1 |
| gspe/pule family protein | SVI_RS01390 | Not Available | Positive | 348588 - 350333 | 64447.2 |
| type ii secretion system f family protein | SVI_RS01395 | Not Available | Positive | 350425 - 351645 | 45188.2 |
| hypothetical protein | SVI_RS01400 | Not Available | Positive | 352391 - 352906 | 18747.9 |
| tfp pilus assembly protein fimt/fimu | SVI_RS01405 | Not Available | Positive | 353040 - 353672 | 22002.0 |
| type ii secretion system protein | SVI_RS01410 | Not Available | Positive | 353769 - 354284 | 17678.0 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | SVI_RS01415 | Not Available | Positive | 354299 - 354799 | 17186.3 |
| tfp pilus assembly protein fimt/fimu | SVI_RS01420 | Not Available | Positive | 355029 - 355526 | 17489.5 |
| type ii secretion system protein | SVI_RS01425 | Not Available | Positive | 355728 - 356186 | 16624.9 |
| type ii secretion system protein | SVI_RS01430 | Not Available | Positive | 356176 - 356751 | 20742.6 |
Pathways
1440 pathways
Health Effects
No health effects information available for this bacterium.
