Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella violacea |
| Strain | DSS12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Psychrophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1371241 bp
Thymine Count
1371987 bp
Guanine Count
1108518 bp
Cytosine Count
1110352 bp
Genome Length
4962103 bp
Protein-coding Genes
3986 genes
Non-Coding Genes
187 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit alpha | SVI_RS11925 | Not Available | Negative | 2873187 - 2873483 | 11191.4 |
| phenylalanine--trna ligase subunit beta | SVI_RS11930 | Not Available | Negative | 2873488 - 2875875 | 87344.9 |
| phenylalanine--trna ligase subunit alpha | SVI_RS11935 | Not Available | Negative | 2875890 - 2876873 | 37075.4 |
| pas domain-containing protein | SVI_RS11940 | Not Available | Positive | 2877441 - 2880044 | 97808.4 |
| rimk/lysx family protein | SVI_RS11945 | Not Available | Negative | 2880182 - 2881051 | 32450.5 |
| stas/sec14 domain-containing protein | SVI_RS11950 | Not Available | Negative | 2881160 - 2881531 | 13903.5 |
| duf3802 family protein | SVI_RS11955 | Not Available | Negative | 2882067 - 2882426 | 13355.0 |
| ycei family protein | SVI_RS11960 | Not Available | Negative | 2882543 - 2883118 | 20734.4 |
| pyridoxamine 5'-phosphate oxidase | SVI_RS11965 | Not Available | Negative | 2883290 - 2883931 | 24199.9 |
| agmatinase | SVI_RS11970 | Not Available | Negative | 2883960 - 2884895 | 34191.7 |
Pathways
1440 pathways
Health Effects
No health effects information available for this bacterium.
