Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella violacea |
| Strain | DSS12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Psychrophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1371241 bp
Thymine Count
1371987 bp
Guanine Count
1108518 bp
Cytosine Count
1110352 bp
Genome Length
4962103 bp
Protein-coding Genes
3986 genes
Non-Coding Genes
187 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit beta | SVI_RS09750 | Not Available | Positive | 2388991 - 2389278 | 10660.8 |
| lapa family protein | SVI_RS09755 | Not Available | Positive | 2389401 - 2389691 | 10961.8 |
| lipopolysaccharide assembly protein lapb | SVI_RS09760 | Not Available | Positive | 2389693 - 2390853 | 44349.0 |
| orotidine-5'-phosphate decarboxylase | SVI_RS09765 | Not Available | Positive | 2390964 - 2391659 | 25056.6 |
| sdr family oxidoreductase | SVI_RS09770 | Not Available | Positive | 2391719 - 2392534 | 28168.3 |
| duf2058 domain-containing protein | SVI_RS09775 | Not Available | Positive | 2392592 - 2393134 | 20637.7 |
| acyl-coa dehydrogenase c-terminal domain-containing protein | SVI_RS09780 | Not Available | Positive | 2393465 - 2395222 | 63258.1 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | SVI_RS09785 | Not Available | Negative | 2395321 - 2396781 | 52775.9 |
| hypothetical protein | SVI_RS21440 | Not Available | Negative | 2396862 - 2397035 | 6562.32 |
| duf1904 domain-containing protein | SVI_RS09790 | Not Available | Positive | 2397393 - 2397725 | 12457.9 |
Pathways
1440 pathways
Health Effects
No health effects information available for this bacterium.
