Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella violacea |
| Strain | DSS12 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Psychrophilic |
| Habitat | Specialized |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Pairs- Singles |
| Sporulation | Nonsporulating |
| Energy source | Heterotroph |
| Pathogenicity | No |
Gene Summary
Adenine Count
1371241 bp
Thymine Count
1371987 bp
Guanine Count
1108518 bp
Cytosine Count
1110352 bp
Genome Length
4962103 bp
Protein-coding Genes
3986 genes
Non-Coding Genes
187 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent flavin oxidoreductase | SVI_RS21075 | Not Available | Positive | 2194674 - 2194919 | 9297.11 |
| transposase | SVI_RS09000 | Not Available | Positive | 2195029 - 2196006 | 37305.8 |
| transposase | SVI_RS09005 | Not Available | Negative | 2196378 - 2197358 | 37594.9 |
| thioredoxin-dependent thiol peroxidase | SVI_RS09010 | Not Available | Negative | 2197613 - 2198083 | 17385.0 |
| glycine cleavage system protein r | SVI_RS09015 | Not Available | Negative | 2198199 - 2198738 | 19969.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SVI_RS09020 | Not Available | Positive | 2198975 - 2199859 | 31000.5 |
| outer membrane protein assembly factor bamc | SVI_RS09025 | Not Available | Positive | 2199863 - 2200984 | 42476.4 |
| efflux rnd transporter periplasmic adaptor subunit | SVI_RS09030 | Not Available | Positive | 2201283 - 2202368 | 40267.6 |
| efflux rnd transporter permease subunit | SVI_RS09035 | Not Available | Positive | 2202365 - 2205460 | 113426.0 |
| pkd domain-containing protein | SVI_RS09040 | Not Available | Positive | 2206103 - 2209474 | 118073.0 |
Pathways
1440 pathways
Health Effects
No health effects information available for this bacterium.
