Denitrovibrio acetiphilus DSM 12809

Gram-negativeBacilliNon-motileAnaerobic

Kingdom

Pseudomonadati

Phylum

Deferribacterota

Class

Deferribacteres

Order

Deferribacterales

Family

Geovibrionaceae

Genus

Denitrovibrio

Description

Denitrovibrio acetiphilus DSM 12809 is a Gram-negative, anaerobic bacterium belonging to the bacilli shape category. It is classified as a chemoorganotroph, utilizing organic compounds as its energy source. This organism thrives in aquatic habitats, demonstrating optimal growth at a temperature of 35°C, within a mesophilic temperature range. D. acetiphilus is characterized by its non-motility and the presence of flagella, although it does not have the ability to form spores. The bacterium has a unique cellular structure, comprising two membranes and a single replicon, which is indicative of its genetic configuration. It is free-living and does not exhibit pathogenicity, suggesting it plays a non-harmful role in its environment. The ecological significance of D. acetiphilus lies in its potential contributions to biogeochemical cycles, particularly in anaerobic environments where it may participate in organic matter decomposition. By breaking down complex organic substrates, this bacterium could facilitate nutrient cycling in aquatic ecosystems, thereby influencing microbial community dynamics and overall ecosystem health. The absence of pathogenic traits further underscores its role as a harmless inhabitant of aquatic habitats, contributing to the biodiversity and functionality of these environments. Access to its genetic information, as noted in accession NC_013943.1, may provide further insights into its metabolic pathways and ecological interactions.

Taxonomy

KingdomPseudomonadati
PhylumDeferribacterota
ClassDeferribacteres
OrderDeferribacterales
FamilyGeovibrionaceae
GenusDenitrovibrio
SpeciesDenitrovibrio acetiphilus
StrainDSM 12809

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Denitrovibrio acetiphilus DSM 12809
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobic
Optimal temperature35
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoorganotroph
PathogenicityNo

Genome Summary

Denitrovibrio acetiphilus DSM 12809, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad-dependent malic enzymeDACET_RS06115Not AvailablePositive1260998 - 126233847750.3
taxi family trap transporter solute-binding subunitDACET_RS06120Not AvailablePositive1262553 - 126358436998.9
trap transporter permeaseDACET_RS06125Not AvailablePositive1263673 - 126571873467.9
hydrogenase maturation proteaseDACET_RS06130Not AvailableNegative1266199 - 126667817556.2
nickel-dependent hydrogenase large subunitDACET_RS06135Not AvailableNegative1266678 - 126836062178.5
ni/fe-hydrogenase cytochrome b subunitDACET_RS06140Not AvailableNegative1268379 - 126957545303.7
hydrogenase 2 operon protein hybaDACET_RS06145Not AvailableNegative1269575 - 127053135874.9
hydrogenase small subunitDACET_RS06150Not AvailableNegative1270512 - 127161539627.5
thump domain-containing class i sam-dependent rna methyltransferaseDACET_RS06155Not AvailablePositive1272504 - 127366743624.9
hypothetical proteinDACET_RS06160Not AvailablePositive1273756 - 12739748313.79

Displaying genes 1231 – 1240 of 3081 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.