Robiginitalea biformata HTCC2501

Gram-negativeBacilliNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Robiginitalea

Description

Robiginitalea biformata HTCC2501 is a Gram-negative, chemoheterotrophic bacterium characterized by its bacilli shape and aerobic metabolism. It thrives in aquatic environments, where it exists as a free-living organism. This species is non-spore-forming and does not exhibit mobility, although it possesses flagella. The optimal growth temperature for R. biformata is 30°C, placing it within the mesophilic temperature range. This indicates that it is well adapted to moderate temperature conditions typically found in aquatic habitats. The bacterium has a unique cellular structure, featuring two membranes and a single replicon, which is characteristic of many members of the Proteobacteria phylum. Given its ecological role as a free-living organism, R. biformata likely contributes to nutrient cycling in its aquatic environment. Its chemoheterotrophic lifestyle suggests that it plays a part in decomposing organic matter, utilizing dissolved organic compounds for energy and growth. As it is not pathogenic, R. biformata can be considered beneficial within its ecosystem, potentially supporting the health and balance of microbial communities in aquatic systems. The accession number NC_013222.1 provides a reference for genomic studies, allowing for further exploration of its genetic traits and metabolic capabilities.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusRobiginitalea
SpeciesRobiginitalea biformata
StrainHTCC2501

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Robiginitalea biformata HTCC2501
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature30
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceChemoheterotroph
PathogenicityNo

Genome Summary

Robiginitalea biformata HTCC2501, complete sequence.

Gene Summary

Adenine Count

786278 bp

Thymine Count

792040 bp

Guanine Count

973982 bp

Cytosine Count

978083 bp

Genome Length

3530383 bp

Protein-coding Genes

3076 genes

Non-Coding Genes

70 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal phosphate-dependent aminotransferaseRB2501_RS01235Not AvailableNegative289696 - 29088643162.1
dna polymerase iii subunit alphaRB2501_RS01240Not AvailableNegative291074 - 294160117268.0
dna polymerase ivRB2501_RS01245Not AvailableNegative294237 - 29545145977.9
hypothetical proteinRB2501_RS01250Not AvailableNegative295695 - 29606012994.5
carboxymuconolactone decarboxylase family proteinRB2501_RS01255Not AvailableNegative296172 - 29652812588.8
rna polymerase sigma factorRB2501_RS01260Not AvailableNegative296525 - 29721727104.9
fad-binding oxidoreductaseRB2501_RS01265Not AvailablePositive297340 - 29800524720.6
gtp cyclohydrolase i foleRB2501_RS01270Not AvailablePositive298007 - 29869325389.5
duf4142 domain-containing proteinRB2501_RS01275Not AvailablePositive298744 - 29926819027.3
plastocyanin/azurin family copper-binding proteinRB2501_RS01280Not AvailablePositive299268 - 29960913069.7

Displaying genes 271 – 280 of 3146 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.