Saccharomonospora viridis DSM 43017

Gram-positiverodMotileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharomonospora

Description

Saccharomonospora viridis DSM 43017 is a Gram-positive, aerobic, rod-shaped bacterium characterized by its thermophilic nature, with an optimal growth temperature of 37°C and a temperature range that accommodates higher temperatures. This organism is motile, possessing flagella that facilitate its movement in various habitats. S. viridis is notable for its ability to sporulate, which allows it to withstand adverse environmental conditions. It is classified as free-living, indicating that it does not rely on a host for survival. However, it exhibits pathogenicity, suggesting that under certain conditions, it may cause disease. The bacterium contains a single replicon and is structured with two membranes, typical of Gram-positive organisms. The presence of S. viridis in multiple habitats highlights its ecological versatility and potential roles in various environments. Its thermophilic nature suggests it may thrive in hot environments, possibly influencing microbial communities in thermal springs or composting processes. The ability to sporulate could enhance its survival in fluctuating conditions, contributing to its ecological success. Understanding the traits of S. viridis can provide insights into its potential applications in biotechnology and its role in the microbial ecosystem, particularly in thermophilic environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharomonospora
SpeciesSaccharomonospora viridis
StrainDSM 43017

Profile

Physiology
Gram staining propertiesPositive
Shaperod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Saccharomonospora viridis DSM 43017
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperature37
Temperature rangeThermophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationSporulating
Energy sourceNot Available
PathogenicityYes

Genome Summary

Saccharomonospora viridis DSM 43017, complete sequence.

Gene Summary

Adenine Count

705775 bp

Thymine Count

702403 bp

Guanine Count

1447224 bp

Cytosine Count

1452947 bp

Genome Length

4308349 bp

Protein-coding Genes

3897 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf5318 domain-containing proteinSVIR_RS19280Not AvailablePositive4256591 - 425698914932.8
transglycosylase domain-containing proteinSVIR_RS19285Not AvailablePositive4257423 - 426006895390.7
glycosyltransferase family 87 proteinSVIR_RS19290Not AvailablePositive4260125 - 426173258720.0
deoxyribonuclease ivSVIR_RS19295Not AvailableNegative4261693 - 426246327719.6
hypothetical proteinSVIR_RS19705Not AvailablePositive4262638 - 426333925044.9
hypothetical proteinSVIR_RS19305Not AvailablePositive4263469 - 426444332605.2
30s ribosomal protein s6SVIR_RS19310Not AvailablePositive4264561 - 426489612478.1
single-stranded dna-binding proteinSVIR_RS19315Not AvailablePositive4264909 - 426537916483.2
30s ribosomal protein s18SVIR_RS19320Not AvailablePositive4265428 - 42656769370.55
50s ribosomal protein l9SVIR_RS19325Not AvailablePositive4265691 - 426614916571.1

Displaying genes 3911 – 3920 of 3958 in total

Metabolites

407 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da

Displaying 1–10 of 407 metabolites

Health Effects

No health effects information available for this bacterium.