Methylovorus glucosotrophus SIP3-4

Gram-negativeRodNon-motileAerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Nitrosomonadales

Family

Methylophilaceae

Genus

Methylovorus

Description

Methylovorus glucosotrophus SIP3-4 is a Gram-negative, aerobic methylotrophic bacterium characterized by its rod shape and mesophilic temperature range. This organism is non-motile and does not form spores, indicating a stable lifestyle suited for its specific habitat. Methylovorus glucosotrophus SIP3-4 thrives in aquatic environments, where it plays a significant role in the utilization of methanol and related compounds as its primary energy source. As a free-living organism, Methylovorus glucosotrophus SIP3-4 possesses a single replicon, which may suggest a streamlined genome adapted for its ecological niche. The ability to metabolize methanol not only supports its growth but also contributes to the cycling of carbon within aquatic ecosystems. The utilization of methanol as an energy source highlights its potential importance in biogeochemical processes, particularly in environments where methanol is available as a result of natural or anthropogenic activities. Understanding the traits of Methylovorus glucosotrophus SIP3-4 enhances our knowledge of microbial diversity and function in aquatic habitats. This microorganism exemplifies the ecological significance of methylotrophs in carbon cycling, offering insights into their role in maintaining ecosystem balance and potentially influencing nutrient dynamics in aquatic systems. The accession number for this strain is NC_012970.1, which can be referenced for further genomic studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNitrosomonadales
FamilyMethylophilaceae
GenusMethylovorus
SpeciesMethylovorus glucosotrophus
StrainSIP3-4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy source Methylotroph
PathogenicityNot Available

Genome Summary

Methylovorus glucosotrophus SIP3-4


Gene Summary

Adenine Count

20409 bp

Thymine Count

21219 bp

Guanine Count

16877 bp

Cytosine Count

18175 bp

Genome Length

76680 bp

Protein-coding Genes

76 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abrb/maze/spovt family dna-binding domain-containing proteinMSIP34_RS15490Not AvailableNegative24599 - 248328610.39
putative bifunctional diguanylate cyclase/phosphodiesteraseMSIP34_RS14355Not AvailableNegative24917 - 2628451096.8
type i dna topoisomeraseMSIP34_RS14360Not AvailableNegative26286 - 2805865395.5
lytic transglycosylase domain-containing proteinMSIP34_RS14365Not AvailableNegative28058 - 2874724969.9
dna cytosine methyltransferaseMSIP34_RS14370Not AvailableNegative28758 - 3041060479.4
type iv secretory system conjugative dna transfer family proteinMSIP34_RS14750Not AvailableNegative30423 - 3288292118.0
hypothetical proteinMSIP34_RS15030Not AvailablePositive33156 - 3389928222.8
zincin-like metallopeptidase domain-containing proteinMSIP34_RS14380Not AvailableNegative34032 - 3609276950.8
hypothetical proteinMSIP34_RS15295Not AvailableNegative36082 - 362285132.74
eco57i restriction-modification methylase domain-containing proteinMSIP34_RS14385Not AvailableNegative36203 - 42028217449.0

Displaying genes 31 – 40 of 76 in total

Metabolites

1668 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm0001639CobinamideC48H72CoN11O8Chemical structure of Cobinamide13497-85-3
Average990.0874Da
Monoisotopic989.4897335Da

Displaying 1–10 of 1668 metabolites

Health Effects

No health effects information available for this bacterium.