Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts glucitol/sorbitol transporter subunit iia | PC1_RS03755 | Not Available | Negative | 872523 - 872894 | 13487.3 |
| 2-keto-3-deoxygluconate permease | PC1_RS03760 | Not Available | Negative | 872907 - 873932 | 35542.4 |
| four-carbon acid sugar kinase family protein | PC1_RS03765 | Not Available | Negative | 874049 - 875767 | 61968.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | PC1_RS03770 | Not Available | Negative | 875801 - 876805 | 36430.0 |
| triose-phosphate isomerase | PC1_RS03775 | Not Available | Positive | 877051 - 877845 | 28774.4 |
| sugar-binding transcriptional regulator | PC1_RS03780 | Not Available | Positive | 877879 - 878844 | 35245.0 |
| nadp-dependent oxaloacetate-decarboxylating malate dehydrogenase | PC1_RS03785 | Not Available | Positive | 879098 - 881377 | 82257.0 |
| tryptophan permease | PC1_RS03790 | Not Available | Positive | 881568 - 882842 | 46122.2 |
| yaii/yqxd family protein | PC1_RS03795 | Not Available | Negative | 882909 - 883361 | 16762.0 |
| oxygen-dependent coproporphyrinogen oxidase | PC1_RS03800 | Not Available | Negative | 883365 - 884297 | 35232.3 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
