Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | PC1_RS03455 | Not Available | Positive | 807087 - 809480 | 88017.9 |
| sigma-70 family rna polymerase sigma factor | PC1_RS03460 | Not Available | Positive | 809654 - 810178 | 19985.4 |
| fecr domain-containing protein | PC1_RS03465 | Not Available | Positive | 810175 - 811122 | 35296.6 |
| ai-2e family transporter | PC1_RS03470 | Not Available | Positive | 811305 - 812315 | 37246.5 |
| mfs transporter | PC1_RS03475 | Not Available | Negative | 812487 - 814013 | 56437.3 |
| hypothetical protein | PC1_RS03480 | Not Available | Positive | 814397 - 814771 | 13375.1 |
| mannitol dehydrogenase family protein | PC1_RS03485 | Not Available | Negative | 814764 - 816251 | 54943.9 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | PC1_RS03490 | Not Available | Positive | 816574 - 817854 | 45547.3 |
| l,d-transpeptidase family protein | PC1_RS03495 | Not Available | Negative | 817914 - 818984 | 38361.7 |
| deaminated glutathione amidase | PC1_RS03500 | Not Available | Negative | 819168 - 819965 | 28984.2 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
