Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate c-p lyase system protein phnl | PC1_RS02400 | Not Available | Positive | 569135 - 569866 | 27262.6 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | PC1_RS02405 | Not Available | Positive | 569856 - 570992 | 42178.1 |
| ribose 1,5-bisphosphokinase | PC1_RS02410 | Not Available | Positive | 570995 - 571564 | 21329.5 |
| phosphonate metabolism protein phnp | PC1_RS02415 | Not Available | Positive | 571603 - 572400 | 29603.3 |
| autotransporter domain-containing protein | PC1_RS02420 | Not Available | Positive | 572709 - 575033 | 78274.1 |
| alpha/beta hydrolase | PC1_RS02425 | Not Available | Positive | 575169 - 575996 | 30052.0 |
| ccdb family protein | PC1_RS02430 | Not Available | Negative | 576167 - 576379 | 8017.69 |
| duf2798 domain-containing protein | PC1_RS02435 | Not Available | Negative | 576506 - 576769 | 9752.54 |
| lysr family transcriptional regulator | PC1_RS02440 | Not Available | Positive | 576898 - 577800 | 32815.6 |
| aaa family atpase | PC1_RS02445 | Not Available | Positive | 578523 - 579746 | 47138.0 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
