Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptide abc transporter atp-binding protein | PC1_RS02120 | Not Available | Negative | 487195 - 488904 | 61468.1 |
| abc transporter permease | PC1_RS02125 | Not Available | Negative | 488901 - 489767 | 30765.4 |
| abc transporter permease | PC1_RS02130 | Not Available | Negative | 489760 - 490719 | 34448.9 |
| abc transporter substrate-binding protein | PC1_RS02135 | Not Available | Negative | 490697 - 492310 | 58784.4 |
| yagu family protein | PC1_RS02140 | Not Available | Positive | 493046 - 493660 | 23009.1 |
| l-rhamnose/proton symporter rhat | PC1_RS02145 | Not Available | Negative | 493909 - 494943 | 37460.3 |
| tigr00645 family protein | PC1_RS02150 | Not Available | Positive | 495271 - 495777 | 18947.8 |
| nadp-dependent oxidoreductase | PC1_RS02155 | Not Available | Positive | 495872 - 496909 | 37327.8 |
| helix-turn-helix domain-containing protein | PC1_RS02160 | Not Available | Positive | 496997 - 497821 | 31420.8 |
| aspartate aminotransferase family protein | PC1_RS02165 | Not Available | Positive | 498020 - 499399 | 49932.1 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
