Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium-translocating p-type atpase | PC1_RS02070 | Not Available | Negative | 475093 - 477804 | 99765.6 |
| methyl-accepting chemotaxis protein | PC1_RS02075 | Not Available | Negative | 478322 - 479899 | 57009.9 |
| l-rhamnose mutarotase | PC1_RS02080 | Not Available | Negative | 480455 - 480769 | 12371.6 |
| rhamnulose-1-phosphate aldolase | PC1_RS02085 | Not Available | Negative | 480858 - 481682 | 30243.3 |
| l-rhamnose isomerase | PC1_RS02090 | Not Available | Negative | 481687 - 482949 | 47380.3 |
| rhamnulokinase | PC1_RS02095 | Not Available | Negative | 482946 - 484436 | 54564.1 |
| hth-type transcriptional activator rhas | PC1_RS02100 | Not Available | Positive | 484772 - 485611 | 31840.4 |
| helix-turn-helix domain-containing protein | PC1_RS02105 | Not Available | Positive | 485636 - 486490 | 32841.3 |
| copg family ribbon-helix-helix protein | PC1_RS02110 | Not Available | Positive | 486552 - 486842 | 11076.7 |
| amino acid abc transporter permease | PC1_RS02115 | Not Available | Positive | 486830 - 487135 | 11334.9 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
