Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1190 family protein | PC1_RS01585 | Not Available | Negative | 364552 - 365226 | 23518.7 |
| outer membrane channel protein tolc | PC1_RS01590 | Not Available | Negative | 365493 - 366884 | 50534.0 |
| hypothetical protein | PC1_RS22250 | Not Available | Negative | 367019 - 367174 | 5671.95 |
| adp-ribose diphosphatase | PC1_RS01595 | Not Available | Positive | 367217 - 367849 | 23619.9 |
| duf1249 family protein | PC1_RS01600 | Not Available | Positive | 367853 - 368284 | 16908.6 |
| 3',5'-cyclic-amp phosphodiesterase | PC1_RS01605 | Not Available | Positive | 368392 - 369219 | 31025.8 |
| esterase yqia | PC1_RS01610 | Not Available | Positive | 369219 - 369800 | 21715.1 |
| dna topoisomerase iv subunit b | PC1_RS01615 | Not Available | Positive | 369893 - 371788 | 70066.0 |
| aldo/keto reductase | PC1_RS01620 | Not Available | Positive | 371982 - 372995 | 37516.6 |
| lysr family transcriptional regulator | PC1_RS01625 | Not Available | Positive | 373173 - 374069 | 33394.4 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
