Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome hibernation promoting factor | PC1_RS01390 | Not Available | Negative | 322237 - 322524 | 10943.2 |
| rna polymerase factor sigma-54 | PC1_RS01395 | Not Available | Negative | 322548 - 323981 | 53509.2 |
| lps export abc transporter atp-binding protein | PC1_RS01400 | Not Available | Negative | 324031 - 324756 | 26711.2 |
| lipopolysaccharide abc transporter substrate-binding protein lpta | PC1_RS01405 | Not Available | Negative | 324760 - 325332 | 20903.8 |
| lps export abc transporter periplasmic protein lptc | PC1_RS01410 | Not Available | Negative | 325313 - 325879 | 21085.9 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | PC1_RS01415 | Not Available | Negative | 325876 - 326442 | 20535.8 |
| arabinose-5-phosphate isomerase kdsd | PC1_RS01420 | Not Available | Negative | 326461 - 327552 | 39090.2 |
| calcium/sodium antiporter | PC1_RS01425 | Not Available | Negative | 327593 - 328558 | 34161.1 |
| phospholipid abc transporter atp-binding protein mlaf | PC1_RS01430 | Not Available | Positive | 328860 - 329672 | 29510.9 |
| lipid asymmetry maintenance abc transporter permease subunit mlae | PC1_RS01435 | Not Available | Positive | 329680 - 330462 | 27809.8 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
