Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent uric acid utilization protein aega | PC1_RS21390 | Not Available | Negative | 4840462 - 4842486 | 73390.0 |
| csgg/hfab family protein | PC1_RS21395 | Not Available | Positive | 4842914 - 4843585 | 24013.4 |
| duf4810 domain-containing protein | PC1_RS21400 | Not Available | Positive | 4843604 - 4843963 | 13282.0 |
| duf799 domain-containing protein | PC1_RS21405 | Not Available | Positive | 4843960 - 4844619 | 23274.7 |
| mfs transporter | PC1_RS21410 | Not Available | Negative | 4844710 - 4846212 | 52745.7 |
| ggdef domain-containing protein | PC1_RS21415 | Not Available | Negative | 4846308 - 4847750 | 55321.4 |
| wyl domain-containing protein | PC1_RS21420 | Not Available | Negative | 4847946 - 4848830 | 33555.1 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | PC1_RS21425 | Not Available | Positive | 4849034 - 4851496 | 93585.8 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | PC1_RS21430 | Not Available | Positive | 4851508 - 4853523 | 76821.0 |
| poly-beta-1,6-n-acetyl-d-glucosamine synthase | PC1_RS21435 | Not Available | Positive | 4853520 - 4854848 | 50754.4 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
