Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose abc transporter atp-binding protein | PC1_RS20745 | Not Available | Negative | 4684433 - 4685974 | 56847.4 |
| d-xylose abc transporter substrate-binding protein | PC1_RS20750 | Not Available | Negative | 4686095 - 4687090 | 35608.0 |
| xylose isomerase | PC1_RS20755 | Not Available | Positive | 4687450 - 4688772 | 49689.5 |
| xylulokinase | PC1_RS20760 | Not Available | Positive | 4688965 - 4690422 | 52837.1 |
| acyltransferase | PC1_RS20765 | Not Available | Negative | 4690441 - 4691433 | 36756.0 |
| aldehyde dehydrogenase family protein | PC1_RS20770 | Not Available | Negative | 4691637 - 4693172 | 56001.1 |
| formate dehydrogenase accessory sulfurtransferase fdhd | PC1_RS20775 | Not Available | Positive | 4693393 - 4694226 | 29849.9 |
| superoxide dismutase | PC1_RS20780 | Not Available | Positive | 4694463 - 4695089 | 23011.0 |
| methyl-accepting chemotaxis protein | PC1_RS20785 | Not Available | Positive | 4695419 - 4697311 | 68518.4 |
| yibl family ribosome-associated protein | PC1_RS20790 | Not Available | Negative | 4697429 - 4697791 | 13549.7 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
