Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glpm family protein | PC1_RS20695 | Not Available | Positive | 4672646 - 4672987 | 12673.0 |
| mfs transporter | PC1_RS20700 | Not Available | Negative | 4673112 - 4674662 | 53610.9 |
| lysr family transcriptional regulator | PC1_RS20705 | Not Available | Positive | 4674761 - 4675723 | 34569.7 |
| pectinesterase pemb | PC1_RS20710 | Not Available | Positive | 4676372 - 4677574 | 44642.1 |
| helix-turn-helix transcriptional regulator | PC1_RS20715 | Not Available | Positive | 4677926 - 4678654 | 28143.5 |
| acyl-homoserine-lactone synthase cari | PC1_RS20720 | Not Available | Negative | 4678638 - 4679288 | 25121.1 |
| argininosuccinate synthase | PC1_RS20725 | Not Available | Negative | 4679557 - 4680903 | 50011.3 |
| dj-1/pfpi family protein | PC1_RS20730 | Not Available | Positive | 4681315 - 4681890 | 21230.6 |
| d-xylose utilization transcriptional activator xylr | PC1_RS20735 | Not Available | Negative | 4681962 - 4683140 | 44827.7 |
| xylose abc transporter permease xylh | PC1_RS20740 | Not Available | Negative | 4683274 - 4684404 | 39659.8 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
