Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | PC1_RS20600 | Not Available | Negative | 4654936 - 4655559 | 24219.8 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | PC1_RS20605 | Not Available | Positive | 4655757 - 4655978 | 8135.45 |
| type ii toxin-antitoxin system death-on-curing family toxin | PC1_RS20610 | Not Available | Positive | 4655975 - 4656358 | 14348.1 |
| hypothetical protein | PC1_RS20615 | Not Available | Positive | 4656521 - 4657078 | 21277.4 |
| hypothetical protein | PC1_RS20620 | Not Available | Negative | 4657126 - 4657677 | 20820.0 |
| hypothetical protein | PC1_RS20625 | Not Available | Positive | 4657785 - 4658171 | 14710.3 |
| duf596 domain-containing protein | PC1_RS22105 | Not Available | Positive | 4658222 - 4658293 | 2631.2 |
| ai-2e family transporter | PC1_RS20630 | Not Available | Negative | 4658304 - 4659503 | 43509.0 |
| grpb family protein | PC1_RS20635 | Not Available | Negative | 4659597 - 4660097 | 18002.3 |
| fmn-dependent l-lactate dehydrogenase lldd | PC1_RS20640 | Not Available | Negative | 4660211 - 4661371 | 41833.7 |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
