Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium carotovorum |
| Strain | PC1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Bacilli |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1168310 bp
Thymine Count
1169207 bp
Guanine Count
1258460 bp
Cytosine Count
1266936 bp
Genome Length
4862913 bp
Protein-coding Genes
4113 genes
Non-Coding Genes
256 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma d regulator | PC1_RS01095 | Not Available | Negative | 257690 - 258151 | 17581.7 |
| nad(+) diphosphatase | PC1_RS01100 | Not Available | Positive | 258260 - 259042 | 29834.8 |
| uroporphyrinogen decarboxylase | PC1_RS01105 | Not Available | Positive | 259191 - 260255 | 39091.2 |
| deoxyribonuclease v | PC1_RS01110 | Not Available | Positive | 260271 - 260960 | 25533.7 |
| yjag family protein | PC1_RS01115 | Not Available | Positive | 261038 - 261628 | 22559.1 |
| nucleoid-associated protein hu-alpha | PC1_RS01120 | Not Available | Positive | 261833 - 262105 | 9520.45 |
| duf1481 domain-containing protein | PC1_RS01125 | Not Available | Positive | 262110 - 262796 | 25884.0 |
| phosphoribosylamine--glycine ligase | PC1_RS01130 | Not Available | Negative | 262866 - 264152 | 45280.9 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | PC1_RS01135 | Not Available | Negative | 264170 - 265759 | 57471.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 266364 - 267903 | Not Available |
Pathways
1404 pathways
Health Effects
No health effects information available for this bacterium.
